PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu026465.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 227aa    MW: 25441.8 Da    PI: 6.4012
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu026465.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF68.18.6e-221563149
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
       SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                 k+ien snrqvtfskRr g++KKA+EL++L +ae+a+i+ s   +++++
  Oeu026465.1 15 KKIENLSNRQVTFSKRRGGLFKKASELCILSGAEIAIIVHSLGKRVFTF 63
                 68***************************************99999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MMKKTTQGRK KIEIKKIENL SNRQVTFSKR RGGLFKKASE LCILSGAEIA IIVHSLGKRV  60
FTFGHPNIDS IIERFLNGSS RNSESNSQAL VENNFPNMPD YNRHYSHISR ELEVEKKRKE  120
AIDEAKRVDD GSDGFWWDAA VDGLELDELE LYMTKLEELM KNVNIKANDL MLLHSSSSLA  180
AGAPMTGFNP TIEPCSFDDI LVNQNHIGNY DYGNCIAPFG DFGQHG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.18e-43M-type_MADS family protein