PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu026517.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

AP2

Protein Properties

Length: 220aa MW: 25185.2 Da PI: 10.4485

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu026517.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.9	2.2e-17	19	67	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 ++ V +++ +g+W+AeIrdp + + +r++lg+f+tae A a+++a+++++g Oeu026517.1 19 HRVVKQRP-WGKWAAEIRDP---N-KaARVWLGTFDTAEAASYAYDEAALRFKG 67 799***.******9...3.35**********************988 PP
2	AP2	57.4	3.6e-18	152	200	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +k V +++ +g+W+AeIrdp + + +r++lg+f+tae Aa a+++a+++++g Oeu026517.1 152 HKVVKQRP-WGKWAAEIRDP---N-KaARVWLGTFDTAEAAAHAYDEAALRFKG 200 899***.******9...3.35**********************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MMCINIHKGS PDQQRRRDHR VVKQRPWGKW AAEIRDPNKA ARVWLGTFDT AEAASYAYDE 60 AALRFKGNKA KLNFPERVQG KTACYLTTRR DLPVVSESTT QTYRPLSQEN RFNVQNYAEF 120 LRRGDDSNLN YGVSGFYYHG YGSPDQQRRR DHKVVKQRPW GKWAAEIRDP NKAARVWLGT 180 FDTAEAAAHA YDEAALRFKG NKAKLNFPER VQGKTASVT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13330.1	6e-30	ERF family protein