PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu026876.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

LBD

Protein Properties

Length: 237aa MW: 24649.1 Da PI: 7.1348

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu026876.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	128.4	3.2e-40	25	125	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 +C aCk+lrrkC+++C++apyf +eq +++fa+vhk+FGasnv+kll ++p ++r +a+ +++yeA+ar+rdPvyG+v++i++lqqq+ +l+ael++l Oeu026876.1 25 PCGACKFLRRKCVAGCIFAPYFDSEQgAAHFAAVHKVFGASNVSKLLLHVPANKRLEAVVTICYEAQARLRDPVYGCVSHIFALQQQVVNLQAELSYL 122 7*********************9989******************************************************************99 PP DUF260 98 kee 100 k++ Oeu026876.1 123 KAH 125 876 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MSGNPSGSNN GGGGSSSGSS GGGSPCGACK FLRRKCVAGC IFAPYFDSEQ GAAHFAAVHK 60 VFGASNVSKL LLHVPANKRL EAVVTICYEA QARLRDPVYG CVSHIFALQQ QVVNLQAELS 120 YLKAHLAALE LPTPLPPPPT LPQPLLIPSA TLSMFDLPTA PPTYDFSSLF DPMVTMPSRQ 180 IDHHLLGATR APPEISSSAG GGGGGDLQEL ARELLYRCGP PTVEASSLPN PSKDNL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45420.1	2e-66	LBD family protein