PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu026909.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 812aa    MW: 87593.5 Da    PI: 6.2273
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu026909.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS415.45e-1274458002374
         GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                   +lLl+cAeavs++++e+a+++L ++sela+p g++ qR+aayf eA++ar+++s+ ++y+alp+ + s    ++ ++a+++f+ +sP++kfsh+taN
  Oeu026909.1 445 LSLLLQCAEAVSAENMEEANKMLLEISELATPFGTSAQRVAAYFSEAMSARIVNSCLGIYAALPVVPHS----QKMASAFQVFNGISPFVKFSHFTAN 538
                  689**************************************************************9996....89999******************** PP

         GRAS 100 qaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                  qaI ea+e+e+rvHiiD+di+qGlQWp L++ LasRp+gpp +R+Tg+g     s e+le+tg+rL++fAe+lg+pfef + va+++ +l++++L+++
  Oeu026909.1 539 QAIQEAFEREDRVHIIDLDIMQGLQWPGLFHILASRPGGPPFVRLTGLGT----SMEALEATGKRLSDFAEKLGLPFEFAP-VADKIGNLNPQRLSIS 631
                  **************************************************....***************************.7*************** PP

         GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreiv 295
                  + Ea+aV++    h+++d ++s ++     L+l+++l Pkvv+vveq+++h ++sFl rf+ea++yysalfdsl   +++eseer+ vE++ll+rei+
  Oeu026909.1 632 ETEAVAVHWLQ--HSFYDVTGSDTN----ALWLLQRLCPKVVTVVEQDLSH-AGSFLGRFVEAIHYYSALFDSLGDCYGEESEERHIVEQQLLSREIR 722
                  **********9..999999999999....**********************.899******************************************* PP

         GRAS 296 nvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  nv+a  g +r  + + + +Wrer++++GFk v+l+ +aa+qa lll +++sdgy++ e++g+l lgW+d  L+++SaWr
  Oeu026909.1 723 NVLAVGGPSRSGEVK-FTNWRERFQQSGFKGVSLGGNAAAQATLLLGMFPSDGYTLVEDNGALKLGWRDLCLLTASAWR 800
                  *********888776.**************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 812 aa     Download sequence    
MASGFTLKED AHIANVNGSG AESSSESPLM TTGCSNAPPL LPTLLDQGPS DKGRSTLRKR  60
AATEMELQAG NGGADCHNKF LRRTATQPLG ESGVCSFMGG GDLTSPNPLL RSTHVANYST  120
MMSMSPSSTN LTSGKSGSGS EPAISTPNLN YHHHLQHQQV QQSQNQSTPS VCVFSGLPLF  180
PPEKAQNPGL QLSPSPGALL LPINTTASTG AGAVSMEESA AATAWIDGII KDLIHSSTNV  240
SIPQLILNVR EIIHSCNPNL AALLEYRLRS LTGTESFTNY TGRRKEALPP VSLQRHDHHG  300
QGQIQVGTSG LRLYMDENLF TQSLSESMNQ HLSWPVVTLP ATANAAGIGN SHYLRSIPSA  360
VTSIPTGVSF SVPAATIVSN SNDQVHHSPQ PETHPEQPLE QQQQSQTPAA VTPTASPYTS  420
AVEAIRERKE EMRQKQKDEE GLHLLSLLLQ CAEAVSAENM EEANKMLLEI SELATPFGTS  480
AQRVAAYFSE AMSARIVNSC LGIYAALPVV PHSQKMASAF QVFNGISPFV KFSHFTANQA  540
IQEAFEREDR VHIIDLDIMQ GLQWPGLFHI LASRPGGPPF VRLTGLGTSM EALEATGKRL  600
SDFAEKLGLP FEFAPVADKI GNLNPQRLSI SETEAVAVHW LQHSFYDVTG SDTNALWLLQ  660
RLCPKVVTVV EQDLSHAGSF LGRFVEAIHY YSALFDSLGD CYGEESEERH IVEQQLLSRE  720
IRNVLAVGGP SRSGEVKFTN WRERFQQSGF KGVSLGGNAA AQATLLLGMF PSDGYTLVED  780
NGALKLGWRD LCLLTASAWR PSSHHFPTSI H*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.10.0GRAS family protein