PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu027700.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 145aa MW: 16902.3 Da PI: 10.3892

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu027700.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.4	2.2e-17	15	69	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 ++ ++t+eq++ Le F+ n++++ e++ +LA++lgL+ ++V +W+qNrRa+ k+ Oeu027700.1 15 HKKRLTQEQVRLLEISFNLNNKLNPERKSQLAQELGLPSTRVATWYQNRRARNKN 69 67789***********************************************995 PP
2	HD-ZIP_I/II	91.5	9.7e-30	15	106	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +k+rl++eqv+lLE sF+ ++kL+perK++la+eLgl va W+qnrRAR k++ l + ++aLk ++++++e+n+rL++ev +L++el++ Oeu027700.1 15 HKKRLTQEQVRLLEISFNLNNKLNPERKSQLAQELGLPSTRVATWYQNRRARNKNQCLKVTHKALKLRLENVMEDNARLQAEVPRLKQELNK 106 79**************************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 145 aa Download sequence
MDNFQSHTRK HQLKHKKRLT QEQVRLLEIS FNLNNKLNPE RKSQLAQELG LPSTRVATWY 60 QNRRARNKNQ CLKVTHKALK LRLENVMEDN ARLQAEVPRL KQELNKVHEI FQHHLEKELY 120 PSMVADGFPF VSSDGCDFLA SSIS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53980.1	5e-24	HD-ZIP family protein