PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu027715.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YC
Protein Properties Length: 181aa    MW: 20607 Da    PI: 4.7914
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu027715.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC43.66.6e-1466104136
        NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedv 36 
                  ql++fw++q   +e++tdfknh+lPlarik+i+kaded 
  Oeu027715.1  66 QLQAFWANQmqeVEHTTDFKNHSLPLARIKNIMKADEDN 104
                  89******97777999*********************96 PP
2NF-YC36.69.7e-1210213667101
        NF-YC  67 eenkrrtlkksdiaaavtrtdifdflvdivprdel 101
                  e+nkrrtl+k+dia+a++rtd+f+flvd +p+del
  Oeu027715.1 102 EDNKRRTLQKNDIASAISRTDVFNFLVDFIPQDEL 136
                  689*****************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MCNQEITNDY EEYLSDHSLC YGVITVFLYT IYRYVKATGT PAVAVSSPTT FPASLSSQQQ  60
QQTRQQLQAF WANQMQEVEH TTDFKNHSLP LARIKNIMKA DEDNKRRTLQ KNDIASAISR  120
TDVFNFLVDF IPQDELREEG LGVNQATLFT VQPPLPCMPW QQAQGQLSQP REQQRDTTEG  180
*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1106112RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G56170.16e-42NF-YC family protein