PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu027966.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 345aa MW: 39218.8 Da PI: 6.2495

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu027966.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.2	9e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+d+++++G g+W++ ++ g+ R++k+c++rw +yl Oeu027966.1 14 KGPWTPEEDQKLIDYIQKHGYGNWRALPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	54.6	2.5e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE+e +++++ lG++ W++Ia++++ gRt++++k++w+++ Oeu027966.1 67 RGRFSFEEEETIIQLHSILGNK-WSAIAARLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MGRAPCCDKN GLKKGPWTPE EDQKLIDYIQ KHGYGNWRAL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHSPRL DLLDLSTVLN SSLYNSSHFN FSRLLGMQNI INPDLLRLSQ TQNQDFLLQN 180 NVQANQISNA PVQNQMPPLV QPCQLLETPL QDDRSQLMMQ SNGEGFSQNC PLYEWQSSGL 240 MPSIWEEDYL PAVKNYGYSG PSNQSIIDPP PSDDQTSTFQ SNKSNNFSFQ SVNISTPSSS 300 PTPLRSSSTY INSSSTSHED ERESYCSNML NFDIQDILDA NEFM*

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MGRAPCCDKN GLKKGPWTPE EDQKLIDYIQ KHGYGNWRAL PKNAGLQRCG KSCRLRWTNY  60
LRPDIKRGRF SFEEEETIIQ LHSILGNKWS AIAARLPGRT DNEIKNYWNT HIRKRLLRMG  120
IDPVTHSPRL DLLDLSTVLN SSLYNSSHFN FSRLLGMQNI INPDLLRLSQ TQNQDFLLQN  180
NVQANQISNA PVQNQMPPLV QPCQLLETPL QDDRSQLMMQ SNGEGFSQNC PLYEWQSSGL  240
MPSIWEEDYL PAVKNYGYSG PSNQSIIDPP PSDDQTSTFQ SNKSNNFSFQ SVNISTPSSS  300
PTPLRSSSTY INSSSTSHED ERESYCSNML NFDIQDILDA NEFM*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	1e-111	MYB family protein