PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu028044.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family SBP
Protein Properties Length: 141aa    MW: 14827.5 Da    PI: 9.1802
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu028044.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP781.5e-2478136159
                  --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS- CS
          SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeek 59 
                  +CqvegCeadls ak y++rhkvC ++sk+p+v+v+gleqrfCqq sr+h   + D +k
  Oeu028044.1  78 RCQVEGCEADLSGAKAYYSRHKVCGTYSKSPTVIVAGLEQRFCQQYSRYHIDGDQDRNK 136
                  6*************************************************988888776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    
MELGSASASS SSSTSGGSES HNGFKFGKKI YFEDVGVGVQ DKFGGGPPSL PPKAAGLPLP  60
SPAKKRRNSV VQGGQPPRCQ VEGCEADLSG AKAYYSRHKV CGTYSKSPTV IVAGLEQRFC  120
QQYSRYHIDG DQDRNKGVID *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57920.13e-26SBP family protein