PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu028296.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 285aa MW: 32376.6 Da PI: 5.9878

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu028296.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	55.7	8.6e-18	79	132	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe ++++ e++ +LA+ lgL+ rq+ +WFqNrRa++k Oeu028296.1 79 KKRRLNMEQVKTLEKNFELGNKLQPERKMQLARALGLQPRQIAIWFQNRRARWK 132 456899***********************************************9 PP
2	HD-ZIP_I/II	128.8	2.3e-41	78	168	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 ekkrrl+ eqvk+LE++Fe +kL+perK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdye Lkr+++a+k+en++L++e+++L++e+ Oeu028296.1 78 EKKRRLNMEQVKTLEKNFELGNKLQPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEILKRQFEAVKAENDALQAENQKLQSEI 168 69**************************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MAFYSTNFML QTPPELDNDH QPSTSLAPIP PSCPPQHFHG MTPFLGKRSS MSFSGVDVCE 60 ENHGGEDDLS DDGSQMGEKK RRLNMEQVKT LEKNFELGNK LQPERKMQLA RALGLQPRQI 120 AIWFQNRRAR WKTKQLEKDY EILKRQFEAV KAENDALQAE NQKLQSEILA LKINKEPMES 180 INLNKETEGS CSNKSENSSD IRLDISRTPA IDSPLITNPT SRTLFPSSLR PAGMTQFFQS 240 SPRPAEISCH KMDQTVKDEG LCNMFCGMED QTGIWPWLEQ QHFN*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	127	135	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69780.1	1e-112	HD-ZIP family protein