PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu028622.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family Whirly
Protein Properties Length: 168aa    MW: 18379.5 Da    PI: 9.6727
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu028622.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly83.92.2e-267814658126
       Whirly  58 satevaelvdlaskesceffhdpaakgsneGkvrkalkvePlpdGsGlfvnlsvtnslvkgnesfsvPv 126
                   ate+++l++l++k+sceffhdp++ +sn+G+vrk+l+++ + +G G+f++l+v n+++k+n++f+v v
  Oeu028622.1  78 VATEIGSLISLGPKDSCEFFHDPSMLSSNAGQVRKSLSIKVHDNGGGYFISLNVVNNILKTNDRFVVLV 146
                  68***************************************************************7754 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MFSPLLQGGE VVTNFVLLLV YSGKSAAKIF APYSIYKGKA ALSASPILPR FSKLEASGGF  60
RVDRRGLVFP ECLYLCFVAT EIGSLISLGP KDSCEFFHDP SMLSSNAGQV RKSLSIKVHD  120
NGGGYFISLN VVNNILKTND RFVVLVPIFF FFFTLRAYQF VVSSIVQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71260.17e-48Whirly family protein