PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu028828.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

ARF

Protein Properties

Length: 1093aa MW: 121324 Da PI: 6.6098

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu028828.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	68.5	9.3e-22	133	234	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k+lt sd++++g +++p++ ae+ ++++++ +l+ +d++ +sW++++i+r++++r++lt+GW+ Fv+ ++L +gD+++F ++++++ Oeu028828.1 133 FCKTLTASDTSTHGGFSVPRRSAEKTfpaldftMQPPAQ--ELVARDLHDNSWTFRHIFRGQPKRHLLTTGWSLFVSGKRLFAGDSILFI--RDEKQQ 226 99*******************999*96555444..8********************************************..568888 PP .EEEEE-S CS B3 92 lvvkvfrk 99 l+++++r+ Oeu028828.1 227 LLLGIRRA 234 9**997 PP
2	Auxin_resp	120.9	9.7e-40	259	342	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaa+++s+F v+YnPras+seFv++++k+ ka+ +++s+GmRf+m+fetedss+rr++Gt++g+sdldpvrW+nS+Wr+L+ Oeu028828.1 259 AAHAATNNSPFIVFYNPRASPSEFVIPLAKYYKAVCsNQISLGMRFRMMFETEDSSTRRYMGTITGISDLDPVRWKNSQWRNLQ 342 79****************************998669******************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 1093 aa Download sequence
MKATVAGAQP ANTTSNPSEG EPRKSINPEL WHACAGPLVN LPAAGTHVVY FPQGHSEQVA 60 ASMKKDVDGQ IPNYTNLPSK LLCFLHNITL HADPETDEVY AQMTLQPVPS FDKDALLRSD 120 LSMKTNKPQP EFFCKTLTAS DTSTHGGFSV PRRSAEKTFP ALDFTMQPPA QELVARDLHD 180 NSWTFRHIFR GQPKRHLLTT GWSLFVSGKR LFAGDSILFI RDEKQQLLLG IRRANRQPTN 240 LSSSMLSSDS MHIGILAAAA HAATNNSPFI VFYNPRASPS EFVIPLAKYY KAVCSNQISL 300 GMRFRMMFET EDSSTRRYMG TITGISDLDP VRWKNSQWRN LQVGWDESAA GEKRNRVSSW 360 EIEPVTTPFF ICSPTPFFHS KRPRQPGMAD DDSSDLDNLI RRSMPWIGED YGMKDPQAIP 420 GLSLVQWMNM QQNASLANSM QPNYLNPSLA QPIHQLDQFQ KLSTATLNPL DSTLQPQQQL 480 TDTRQPSGQN LINQTSPTSQ VQAQLLHMQS PTQAQNVIQQ SLVNHQLHGN LPQNLNQQQN 540 FMSSHTDHIS QQLHVPENQI QIQLLQKLHQ QQPPLQAQQS SIQQPPSQLI QFQDQQKQLS 600 DVSQNFCTSV LTSQMLDGSQ ATSSSLPQSH VIPQQMTRSN SQTNIRFAHP PQQQKLRHQQ 660 SGILSEIPGQ MGSKLNPMNN QLSTGGIINC QSVVTDEAPS CSTSPSTNNC SSAIQSIMTG 720 RSNQSITPGD EIAQSSTGLL SSSNNLGTIS SNGNLVKDLQ QKPNIKPSLS ISKSQNLGFF 780 ASQQYLNAGG TQIDYFDSSS SATSVLSQND VQTQQNNNLM SFNSQSMMFI DASHDKVQGD 840 PRNSFPLTAN IDNQLGMPMM PDSLITKGME RLGKDFSNGL TSGGDMLSNV VNPKETQPEL 900 SSAMVSQSFG VPDMTFNSND STTNDSSFMN GGAWTPAQMP RLRTYTKVYK RGAVGRSIDI 960 TRYSGYEELK QDLARRFGIE GQLEDRQRIG WKLVYVDHEN DVLLVGDDPW EVFVNYVRCI 1020 KILSPREVQQ MSLDGDFGNS VIQNRACSSS NNGDQGIELQ LDKYKLRSSI FILLVTNIED 1080 SSMQRELQEQ EL*

Sequence ? help Back to Top

Protein Sequence Length: 1093 aa Download sequence

MKATVAGAQP ANTTSNPSEG EPRKSINPEL WHACAGPLVN LPAAGTHVVY FPQGHSEQVA  60
ASMKKDVDGQ IPNYTNLPSK LLCFLHNITL HADPETDEVY AQMTLQPVPS FDKDALLRSD  120
LSMKTNKPQP EFFCKTLTAS DTSTHGGFSV PRRSAEKTFP ALDFTMQPPA QELVARDLHD  180
NSWTFRHIFR GQPKRHLLTT GWSLFVSGKR LFAGDSILFI RDEKQQLLLG IRRANRQPTN  240
LSSSMLSSDS MHIGILAAAA HAATNNSPFI VFYNPRASPS EFVIPLAKYY KAVCSNQISL  300
GMRFRMMFET EDSSTRRYMG TITGISDLDP VRWKNSQWRN LQVGWDESAA GEKRNRVSSW  360
EIEPVTTPFF ICSPTPFFHS KRPRQPGMAD DDSSDLDNLI RRSMPWIGED YGMKDPQAIP  420
GLSLVQWMNM QQNASLANSM QPNYLNPSLA QPIHQLDQFQ KLSTATLNPL DSTLQPQQQL  480
TDTRQPSGQN LINQTSPTSQ VQAQLLHMQS PTQAQNVIQQ SLVNHQLHGN LPQNLNQQQN  540
FMSSHTDHIS QQLHVPENQI QIQLLQKLHQ QQPPLQAQQS SIQQPPSQLI QFQDQQKQLS  600
DVSQNFCTSV LTSQMLDGSQ ATSSSLPQSH VIPQQMTRSN SQTNIRFAHP PQQQKLRHQQ  660
SGILSEIPGQ MGSKLNPMNN QLSTGGIINC QSVVTDEAPS CSTSPSTNNC SSAIQSIMTG  720
RSNQSITPGD EIAQSSTGLL SSSNNLGTIS SNGNLVKDLQ QKPNIKPSLS ISKSQNLGFF  780
ASQQYLNAGG TQIDYFDSSS SATSVLSQND VQTQQNNNLM SFNSQSMMFI DASHDKVQGD  840
PRNSFPLTAN IDNQLGMPMM PDSLITKGME RLGKDFSNGL TSGGDMLSNV VNPKETQPEL  900
SSAMVSQSFG VPDMTFNSND STTNDSSFMN GGAWTPAQMP RLRTYTKVYK RGAVGRSIDI  960
TRYSGYEELK QDLARRFGIE GQLEDRQRIG WKLVYVDHEN DVLLVGDDPW EVFVNYVRCI  1020
KILSPREVQQ MSLDGDFGNS VIQNRACSSS NNGDQGIELQ LDKYKLRSSI FILLVTNIED  1080
SSMQRELQEQ EL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19220.1	0.0	ARF family protein