PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu028865.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HD-ZIP
Protein Properties Length: 810aa    MW: 90267.1 Da    PI: 5.6719
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu028865.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.41.6e-2087142156
                  TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
     Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                  +++ +++t+ q++e+e+lF+++++p+ ++r++L++ lgL+ rqVk+WFqNrR+++k
  Oeu028865.1  87 KKHYHRHTARQIQEMETLFKECPHPDDKQRKKLSQDLGLKPRQVKFWFQNRRTQMK 142
                  688999***********************************************998 PP
2START1632.2e-512825052206
                  HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEEC CS
        START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevis 86 
                  la + ++elvk+ + ++p+W +      e +n +e+ + f+ + +     +++ea r+++vv+m++ +lv ++ld + +W e ++    +a+tl+ + 
  Oeu028865.1 282 LAISSMDELVKMCQTGKPLWIRATdtgkEVLNVEEYARMFSWAMNlkqqeFRIEATRDTAVVIMNSITLVDTFLDAN-KWMELFPsiisRAKTLQIVH 378
                  67899*******************666666666666666654444999999**************************.******************** PP

                  TT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE..TTS-EEEEEEEEE-TTS--..-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SS CS
        START  87 sg......galqlmvaelqalsplvp.RdfvfvRyirq.lgagdwvivdvSvdseqkppe.sssvvRaellpSgiliepksnghskvtwvehvdlkgr 175
                  sg      g l+lm aelqalsplvp R+  f+Ry++   ++g+w+ivd  +d+ q +   s ++ R  ++pSg++i++++ng+s+vtwveh++++++
  Oeu028865.1 379 SGvsghaaGSLHLMHAELQALSPLVPtREAHFLRYCQHnAEEGTWAIVDFPLDNVQTNYPpSFPYYR--RRPSGCIIQDMPNGYSRVTWVEHAEVGDS 474
                  **************************************9***************9998765778888..***************************** PP

                  XXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
        START 176 lphwllrslvksglaegaktwvatlqrqcek 206
                   +h++++++v+sg+a+ga++w+a lqrqc++
  Oeu028865.1 475 NIHQIFNHFVSSGMAFGAQRWLAVLQRQCQR 505
                  *****************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 810 aa     Download sequence    
MYGDCQVLSS MGGNTIPSDT LYSSIQNPNF NFMTNINPFN IFSPIVGKEE NGLAKSKEDM  60
ESGSGSEHIE GFSGNEKEIE EQPQPKKKHY HRHTARQIQE METLFKECPH PDDKQRKKLS  120
QDLGLKPRQV KFWFQNRRTQ MKAQQDRQDN VILRAENENL KNENYRLQAA LRNIVCSNCG  180
DPAMLGEMGF DEQQLRIENA RLKEELQRVC CLIQQYNGRP IQGIGPTPLL SPSLDLDMSV  240
YPRKFEEHGS DMISLPFIPE NSQFPTGNSL MLEEEKALAV ELAISSMDEL VKMCQTGKPL  300
WIRATDTGKE VLNVEEYARM FSWAMNLKQQ EFRIEATRDT AVVIMNSITL VDTFLDANKW  360
MELFPSIISR AKTLQIVHSG VSGHAAGSLH LMHAELQALS PLVPTREAHF LRYCQHNAEE  420
GTWAIVDFPL DNVQTNYPPS FPYYRRRPSG CIIQDMPNGY SRVTWVEHAE VGDSNIHQIF  480
NHFVSSGMAF GAQRWLAVLQ RQCQRLASLM ARNISDLGVI PSPEARKNLM NLAQRMIRTF  540
CLNISTCCGQ SWTAISDSAE DTVRITTRKV TEPGQPNGLI LSAVSTIWLP FPHKQVFDFL  600
RDERCRAQLD VLSNGNPLHE VAHIANGSHP GNCISLFRIN VASNSSQNVE LMLQESCTDD  660
SGSILVYTTI DVDSIQLAMN GEDPSCIPLL PLGFIISPMG HTINDSSITI EADGTQNSEN  720
VNLQPDSGCL LTVGLQVLAS TIPTAKLNLS SVTAINHHLC KTVQQINAAL SSANVNGNCP  780
NNSNFFLSSV EPENSDLASP TNQNHGSMS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46880.10.0HD-ZIP family protein