PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu029000.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 209aa    MW: 23549.2 Da    PI: 9.5185
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu029000.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.40.000111638123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 y+C +C+k Fs+k  +  H++ H
  Oeu029000.1 16 YSCRYCHKKFSSKQAFGGHQNAH 38
                 99**************9999988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MSNVPNTLIN AQERVYSCRY CHKKFSSKQA FGGHQNAHKV ERLVQRNAQE RRNNFKHTWI  60
SSYYGKTFPT HPIAFNSIPK VLNQSIINRS YYSEAIQQAT QGGSNFSHSM LPIAQYALQP  120
DCGYPTWPKS ILRNSQFITP PPKMDNQTVS MWNSTFGTTN FNAGTVLDMS EYLSASSFAQ  180
STHDRNGNTD LEKNQEGLDS GLDLSLRL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57520.12e-11C2H2 family protein