PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu029249.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family M-type_MADS
Protein Properties Length: 226aa    MW: 25412.2 Da    PI: 4.4039
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu029249.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF24.24.5e-082262650
                 HHHHHHT-EEEEEEE-TTSEEEEEE CS
       SRF-TF 26 ELSvLCdaevaviifsstgklyeys 50
                 ELS+LCd++++ +i++++g++  ++
  Oeu029249.1  2 ELSTLCDVKACAVILGPDGQIDSWP 26
                 9********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MELSTLCDVK ACAVILGPDG QIDSWPENRS EVQEVINLYQ NGSRNKKRKQ QYDDRGCNKK  60
QVLGGDEGAL NPEEYLKKID AKLGEVKKRI QFLRSKDQEI EPGWPQKDSQ NLGSHSNVGM  120
LDFGNQLPVD IGGFTSNFHS TNFGPGTSFQ SSQAAFSQLP QQLHMEQPWN CIDSPFWFEP  180
ESALLTGGEQ FLQSYIDNND ESSWMQSPLF QETYCFSPTV DTFLL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39810.17e-12M-type_MADS family protein