PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu029287.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

SBP

Protein Properties

Length: 798aa MW: 89485.8 Da PI: 7.1667

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu029287.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	114.9	4.4e-36	144	219	1	76
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +Cqv++Cead+se+k yhrrh++C +++a++v+++g+++r+CqqC++fh ls+fDe+krsCrr+L++hn+rrr++ Oeu029287.1 144 RCQVPECEADISELKGYHRRHRICLRCANASTVVLDGESKRYCQQCGKFHILSDFDEGKRSCRRKLEHHNRRRRRR 219 6************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 798 aa Download sequence
MQQKSRSPPA ETPVYLPPTP EFPSTDAGNV TGNPNGSSLF DWSDFLDFDM DDNLNLAFDP 60 QVIHGPESES GHDVDPVQPQ SQQPSNSTKV RKRDPRLICS NFLAGRVPCA CPELDEKLEE 120 EASRDTPGKK RVRTARNPAG ATARCQVPEC EADISELKGY HRRHRICLRC ANASTVVLDG 180 ESKRYCQQCG KFHILSDFDE GKRSCRRKLE HHNRRRRRRP NVSKGSIEKE SQQVVLVDDV 240 SCDDDTGKDS ICLSSQIAEP ETLLESEGHV STISSGLGSR AIQSESFLSF DASGETHVNG 300 KKENPKQKYS LSCENKSTFS SVCPAGRISF KLYDWNPAEF PRRLRHQIFE WLASMPVELE 360 GYIRPGCTIL TAFIAMPKLM WLKVLEEPAK CIQELLASPG NMLSGRMHVY LDNKIFRIIK 420 DDFVEEVKVK EGAPKLHSVY PTCFEAGKPM EFVACGTNLL QPQFRFLVSF GGRYLAYNIG 480 VSSVGRKKEG DTNADHQLLK IYVPPTDLYL FGPAFVEVEN QSGLSNFIPI LIGNKEVCEE 540 MVLFQQKFNA SHGSEKQQLS CPRPACEILA SRQAEFSGFL LEVAWSLKKP VSEQQLMSTQ 600 VQRFNYLLNF LIERESTIIL DCVLDCMKSV MDNNLVGISD ADMKSFHRNM DNARNILHRK 660 LEEKEYLVMH ALDGKFSRQS SQRDSRFSVP ATNQGLERTE NTLESRVVLP SLEESVTVPL 720 LNGEVTGLNL KERPRKSCSR LFARTDLTSR PFIFAIVAAV VCFGICAVVL HPQKYCTTYL 780 TKKGYTNSGS SGELIRD*

Sequence ? help Back to Top

Protein Sequence Length: 798 aa Download sequence

MQQKSRSPPA ETPVYLPPTP EFPSTDAGNV TGNPNGSSLF DWSDFLDFDM DDNLNLAFDP  60
QVIHGPESES GHDVDPVQPQ SQQPSNSTKV RKRDPRLICS NFLAGRVPCA CPELDEKLEE  120
EASRDTPGKK RVRTARNPAG ATARCQVPEC EADISELKGY HRRHRICLRC ANASTVVLDG  180
ESKRYCQQCG KFHILSDFDE GKRSCRRKLE HHNRRRRRRP NVSKGSIEKE SQQVVLVDDV  240
SCDDDTGKDS ICLSSQIAEP ETLLESEGHV STISSGLGSR AIQSESFLSF DASGETHVNG  300
KKENPKQKYS LSCENKSTFS SVCPAGRISF KLYDWNPAEF PRRLRHQIFE WLASMPVELE  360
GYIRPGCTIL TAFIAMPKLM WLKVLEEPAK CIQELLASPG NMLSGRMHVY LDNKIFRIIK  420
DDFVEEVKVK EGAPKLHSVY PTCFEAGKPM EFVACGTNLL QPQFRFLVSF GGRYLAYNIG  480
VSSVGRKKEG DTNADHQLLK IYVPPTDLYL FGPAFVEVEN QSGLSNFIPI LIGNKEVCEE  540
MVLFQQKFNA SHGSEKQQLS CPRPACEILA SRQAEFSGFL LEVAWSLKKP VSEQQLMSTQ  600
VQRFNYLLNF LIERESTIIL DCVLDCMKSV MDNNLVGISD ADMKSFHRNM DNARNILHRK  660
LEEKEYLVMH ALDGKFSRQS SQRDSRFSVP ATNQGLERTE NTLESRVVLP SLEESVTVPL  720
LNGEVTGLNL KERPRKSCSR LFARTDLTSR PFIFAIVAAV VCFGICAVVL HPQKYCTTYL  780
TKKGYTNSGS SGELIRD*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	202	220	KRSCRRKLEHHNRRRRRRP
2	206	218	RRKLEHHNRRRRR
3	207	219	RKLEHHNRRRRRR
4	214	219	RRRRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18830.2	0.0	SBP family protein