PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu029306.3
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YC
Protein Properties Length: 259aa    MW: 28643.3 Da    PI: 5.0365
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu029306.3genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC176.13.4e-55811841101
        NF-YC   1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdi 95 
                  ql++fw++q   i+++tdfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlr+w+h+eenkrrtl+k+diaaa+trt+ifdflvdi
  Oeu029306.3  81 QLQNFWANQyeeIDQVTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRAWNHTEENKRRTLQKNDIAAAITRTEIFDFLVDI 178
                  89******9888999*********************************************************************************** PP

        NF-YC  96 vprdel 101
                  vpr++l
  Oeu029306.3 179 VPREDL 184
                  ***987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MDQQVNGQPQ GMGVVGSSAQ NPQSVTSYQG NQMTGPSGPA SAGSTQSSQT AGLLTSPAQM  60
AQHQLAYQHI HQQQQQQLQQ QLQNFWANQY EEIDQVTDFK NHSLPLARIK KIMKADEDVR  120
MISAEAPVIF ARACEMFILE LTLRAWNHTE ENKRRTLQKN DIAAAITRTE IFDFLVDIVP  180
REDLKDEVFA SIPRESLPVG GPAEGLPYYY MPPQPAPPLA APGMFVGKPV DPALYAQQPH  240
PYMGQQMWPQ QPPPPPDS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1154160RRTLQKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08970.36e-72NF-YC family protein