PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu029425.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 146aa    MW: 16824 Da    PI: 8.4205
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu029425.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.79.6e-066890123
                 EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                 ++C +Cgk F  k + ++H +++
  Oeu029425.1 68 FVCRKCGKAFAVKGDWRTHEKNC 90
                 89*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MHMWGHGSQY RKGPESLRGT QPTAMLRLPC YCCEPGCRNN IDHPRAKPLK DFRTLQTHYK  60
RKHGTKPFVC RKCGKAFAVK GDWRTHEKNC GKLWYCTCGS DFKHKRSLKD HIKAFGNGHE  120
AYEMDCFDEE DEPASEIEQD NESSQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57670.14e-97C2H2 family protein