PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu029546.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

NF-YB

Protein Properties

Length: 186aa MW: 20027.5 Da PI: 6.9464

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu029546.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	175.4	5.7e-55	31	125	1	95
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqdrflPian+srimkk+lPan+ki+k+aketvqecvsefisf+tseasdkc+rekrktingddllwa+ lGfedy++plkvyl++yre ++ Oeu029546.1 31 VREQDRFLPIANISRIMKKALPANGKIAKEAKETVQECVSEFISFITSEASDKCKREKRKTINGDDLLWAMVILGFEDYIDPLKVYLARYREGDT 125 69*****************************************************************************************9765 PP

Sequence ? help Back to Top
Protein Sequence Length: 186 aa Download sequence
MADAGMQGVL PGSPDGGSHE SGGDLSPRSN VREQDRFLPI ANISRIMKKA LPANGKIAKE 60 AKETVQECVS EFISFITSEA SDKCKREKRK TINGDDLLWA MVILGFEDYI DPLKVYLARY 120 REGDTKASAK GADGSSRNES VQPSTSSQLA HQGSFSQAIN YGNSQVPTLH VSVHDSKFPL 180 PMLLG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37060.1	2e-77	NF-YB family protein