PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu029715.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 368aa MW: 41758.9 Da PI: 4.9007

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu029715.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.4	1.6e-18	114	160	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +l+++v q+G+++W+ Ia++m R +kqc++rw+++l Oeu029715.1 114 KGQWTEEEDRKLIELVMQYGPRNWTMIAEKMV-LRAGKQCRERWLNHL 160 799***************************.9**********97 PP
2	Myb_DNA-binding	43.7	6.5e-14	166	204	5	45
-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 5 TteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++eE+ ll++++k+ G++ W+ Ia+++ gRt++++k++w+ Oeu029715.1 166 SEEEERLLIEVHKRVGNK-WAEIAKYIA-GRTENSIKNHWN 204 79**************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MADGSTIRMS EGSLAFRRFV SRNGLLSVFV DDERKESAME GMIPMKEENV DPWRSLMAGG 60 STIRMSEGSL AFSEVAWNQD EHVNENSNEV KLTSESPDPR EKREKVQPDG YLIKGQWTEE 120 EDRKLIELVM QYGPRNWTMI AEKMVLRAGK QCRERWLNHL RPNIKSEEEE RLLIEVHKRV 180 GNKWAEIAKY IAGRTENSIK NHWNATKRRK ISRTKIKKPR GENGTRQSTL LQDYIQNKYM 240 DNGSGFTSTS TTSYDAATTI TPPSSTVPEA EGQSFFTFET FEEEMDFMKN LFGNNDSSNN 300 ASMVDKGKAM MYPPAASEMN MQINEDAFLY SEFLDSAIGL TLDLPMNQDP SLEGRMEGDL 360 MGIVSSC*

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MADGSTIRMS EGSLAFRRFV SRNGLLSVFV DDERKESAME GMIPMKEENV DPWRSLMAGG  60
STIRMSEGSL AFSEVAWNQD EHVNENSNEV KLTSESPDPR EKREKVQPDG YLIKGQWTEE  120
EDRKLIELVM QYGPRNWTMI AEKMVLRAGK QCRERWLNHL RPNIKSEEEE RLLIEVHKRV  180
GNKWAEIAKY IAGRTENSIK NHWNATKRRK ISRTKIKKPR GENGTRQSTL LQDYIQNKYM  240
DNGSGFTSTS TTSYDAATTI TPPSSTVPEA EGQSFFTFET FEEEMDFMKN LFGNNDSSNN  300
ASMVDKGKAM MYPPAASEMN MQINEDAFLY SEFLDSAIGL TLDLPMNQDP SLEGRMEGDL  360
MGIVSSC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11050.1	5e-47	MYB family protein