PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu029838.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB_related
Protein Properties Length: 93aa    MW: 10549.5 Da    PI: 9.7544
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu029838.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.66.6e-091356344
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                     +WT    +++ +a +++ ++   +W+ Iar +g  +++ +++ ++
      Oeu029838.1 13 SWTHKQNKKFEEALARYDKDtpdRWNNIARAVG-EKSADEVRRHY 56
                     7********************************.9*********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
MASSSRSSTR SSSWTHKQNK KFEEALARYD KDTPDRWNNI ARAVGEKSAD EVRRHYEALV  60
KDIMQIETDQ VPIPNYSSIP NNGRGYGNNR GY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.12e-29MYB_related family protein