PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu029842.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family ZF-HD
Protein Properties Length: 256aa    MW: 27836.3 Da    PI: 8.6036
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu029842.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer103.11.9e-3245101360
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                  k+ Y+eClkNhAas+Gg+++DGCgEfmps geegt +alkCaAC+CHRnFHR+e++ e
  Oeu029842.1  45 KISYRECLKNHAASIGGNVTDGCGEFMPS-GEEGTLEALKCAACNCHRNFHRKEHHGE 101
                  789*************************9.999********************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MALSGEDKDM RMQGSTGYNS VEIQQEKTRN LDPNSGGSKL KTPAKISYRE CLKNHAASIG  60
GNVTDGCGEF MPSGEEGTLE ALKCAACNCH RNFHRKEHHG EVAAAGIIHP LPLPPPLPSP  120
SMGQHRMGVH NVNHWSSMVQ PVKMAFGSGG GGGGGGGSVG TDSSSEELNF NAYQSNTAAP  180
PPPQFVNKKR FRTKFTNEQK DKMLEFAEKL GWRIPREDDT EVQRFCAEVG VKRQVFKVWM  240
HNNKSSSAKK DPQEI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.16e-59ZF-HD family protein