PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu029866.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 259aa    MW: 28678.8 Da    PI: 7.9598
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu029866.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.88e-0592114123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  ++C++C ++F ++  L  H++ H
  Oeu029866.1  92 FSCNYCQRTFYSSQALGGHQNAH 114
                  89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MSTSKDEFIS GTLGIHSPLE TPLQNLQENN LDGDEKQELN RGSKRESKLK ISGENFDPKS  60
NLELNLIDCL EKAPSSTSPE TPEASDDEPR VFSCNYCQRT FYSSQALGGH QNAHKRERIL  120
AKRRHSLGTS YMAAFGQSHN HYPSMSALPL NGSFSNSLGI QAHSTIHKPS HALGASGCRS  180
FYRHAGWSRI PNEQQPSVGK LAVQKYNSSA SNELFPRSDT VTSSIVRKST DCPQDWMEVF  240
HLKTNQDSLQ KLDLSLKL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10970.16e-39C2H2 family protein