PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu030146.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Trihelix

Protein Properties

Length: 945aa MW: 105684 Da PI: 7.8352

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu030146.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	30.4	1e-09	175	236	16	77
trihelix 16 emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsesss 77 +m +rgk ++ + +ev++++ ++g++r +k+ kw+n+ ++++k+ e+e++++ e+ + Oeu030146.1 175 DMAAVTGRGKTRADKDKEVAEFLNRHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGEREVGK 236 666667889999******************************************99766653 PP

Sequence ? help Back to Top
Protein Sequence Length: 945 aa Download sequence
MVVSGGATFI PPTLYIPSGG TPVSLEQQQQ FEAFNPKRPR HTTGQWKLLP SPSQQKQSQV 60 NILSTESSPS PSGPTPATAA ANRPPPQPPN TTASSSDTTS SPPHSPHRFT ASGQETSKPP 120 DEQVIRQQFR KGKYVSPVWK PNEMLWLARA WRVQYQGGSE GSGSSVEGAA ASVGDMAAVT 180 GRGKTRADKD KEVAEFLNRH GVNRDAKTAG TKWDNMLGEF RKVYEWERGG EREVGKSYFR 240 LSPYERKLHR LPASFDEEVF EELAQFMGPR MRTPQTRGGA AVIPGGDDIR LPFTTSHKSL 300 PQQQSTLRDD DPLSARTKQL VVTSGVGEQQ FHHGIRGSLL GLESSSLEIA GASSFSTSSK 360 EPRRIGKIRM LWEESVNLWG EEGEHSNMGR VKLQGSSFLN ADELTFLDDS MVVCSMEAFE 420 DGPLKGFSVD RFVSGQQVKV FGRRKSSLAP VPCGFNERSK LRSTELPVRS ISPLEFQDPS 480 EYYVGCLQVP PTMLPSLFEL SWHLQEPPPE ELRFPVRKDV YRDLPQGKEL FFTTSTELLD 540 CRAITYDILS PIMRPNPSLT GATSTSRDSF IGLWDDCMNR IISKFCSIEM VFVRKSSSSL 600 AETVKDQWPN VTGFIRNFCL WRGEETDQLR EGHLDPSNSI VDKLLWTYMD LPYILGYYAV 660 GYIVTFCALS RSQDRVIRTD LYTVDLSTPV ERTKALVPCW RIAGLLPLLA DRCYNFFTNG 720 NSYKIVPYSD FERIDLGDGN IMELTPNTVN RLFSSKRRWA AAKEIYDFLD HRIPHAEFII 780 RSSEKDLAMV LKPRGCKFRP ANCDQLIEAL KHVTKALVAL HDLSFMHRDL SWDKVMKRID 840 RENEWFITGF DEAMGAPQLY PHGGASPGRH APEMGRGLHG VKVDVWGVGQ LVKTCGLVGM 900 PKLLRELQNR CLDHNPEQRP TAADCYHHLL QLQSSMSAAA TGGY*

Sequence ? help Back to Top

Protein Sequence Length: 945 aa Download sequence

MVVSGGATFI PPTLYIPSGG TPVSLEQQQQ FEAFNPKRPR HTTGQWKLLP SPSQQKQSQV  60
NILSTESSPS PSGPTPATAA ANRPPPQPPN TTASSSDTTS SPPHSPHRFT ASGQETSKPP  120
DEQVIRQQFR KGKYVSPVWK PNEMLWLARA WRVQYQGGSE GSGSSVEGAA ASVGDMAAVT  180
GRGKTRADKD KEVAEFLNRH GVNRDAKTAG TKWDNMLGEF RKVYEWERGG EREVGKSYFR  240
LSPYERKLHR LPASFDEEVF EELAQFMGPR MRTPQTRGGA AVIPGGDDIR LPFTTSHKSL  300
PQQQSTLRDD DPLSARTKQL VVTSGVGEQQ FHHGIRGSLL GLESSSLEIA GASSFSTSSK  360
EPRRIGKIRM LWEESVNLWG EEGEHSNMGR VKLQGSSFLN ADELTFLDDS MVVCSMEAFE  420
DGPLKGFSVD RFVSGQQVKV FGRRKSSLAP VPCGFNERSK LRSTELPVRS ISPLEFQDPS  480
EYYVGCLQVP PTMLPSLFEL SWHLQEPPPE ELRFPVRKDV YRDLPQGKEL FFTTSTELLD  540
CRAITYDILS PIMRPNPSLT GATSTSRDSF IGLWDDCMNR IISKFCSIEM VFVRKSSSSL  600
AETVKDQWPN VTGFIRNFCL WRGEETDQLR EGHLDPSNSI VDKLLWTYMD LPYILGYYAV  660
GYIVTFCALS RSQDRVIRTD LYTVDLSTPV ERTKALVPCW RIAGLLPLLA DRCYNFFTNG  720
NSYKIVPYSD FERIDLGDGN IMELTPNTVN RLFSSKRRWA AAKEIYDFLD HRIPHAEFII  780
RSSEKDLAMV LKPRGCKFRP ANCDQLIEAL KHVTKALVAL HDLSFMHRDL SWDKVMKRID  840
RENEWFITGF DEAMGAPQLY PHGGASPGRH APEMGRGLHG VKVDVWGVGQ LVKTCGLVGM  900
PKLLRELQNR CLDHNPEQRP TAADCYHHLL QLQSSMSAAA TGGY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	7e-08	Trihelix family protein