PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu030476.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Trihelix

Protein Properties

Length: 589aa MW: 64059.2 Da PI: 7.7257

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu030476.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	60.3	4.9e-19	89	176	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 +W++ + +L+ea++++ +l+rg+l++++Weev++ + r + ++s +qCk+k +nl+kryk ++++ +++ s+s++p+f+q+e+ Oeu030476.1 89 EWSETAIACLLEAYTDKFMQLNRGNLRGKDWEEVAATVgeRCDKQSKSVEQCKNKVDNLKKRYKLERHRLSNG-GVSVSHWPWFQQMEH 176 5***********************************777778999*********************9.66778******85 PP

Sequence ? help Back to Top
Protein Sequence Length: 589 aa Download sequence
MASCDDDFSL LDDHQNPDAT QPSTNTQTPQ FTVNPYDQDS DPFDSEPDPS SRSCKRASER 60 DDVNNDVSKR TRLPSASSSA GDYRKDREEW SETAIACLLE AYTDKFMQLN RGNLRGKDWE 120 EVAATVGERC DKQSKSVEQC KNKVDNLKKR YKLERHRLSN GGVSVSHWPW FQQMEHIVGN 180 SMAAKAAADE EKNSVSGGSS ISTRHPKRHA TATATASPGS QIVNVKLKPS TNLRWRRVVF 240 KISGAALAGT APNNIDPKVA MLVAREISIA CRYGVEVAIV VGGRNFFCGD AWVTSTGLDR 300 CTAYQIGMMA TVMNSILLQS ALEKLGVKTR MQSAFSMPEV AEPYSRQRAI RHLEKGRVVI 360 FGGIGAGTGN PLFSTDTAAA LRASEIHADA VLKGANTDGV FVCDPRSNNI AAEHISFRDL 420 ASRGASPMDM MAMTYCEENG IPVVIFDLHE LGNISRALCG EPVDIEGNLS IISSGVFKLV 480 RVLERSSSKS RNCTPEHAIF SSIQKKLDKT AHHITRASVI TEKLLKISSE ASQYLGTKSG 540 DMLGLVQSLM EEGNSTLLSA HFAHFSVVPD VLLRKHGAGQ ADRGGVNF*

Sequence ? help Back to Top

Protein Sequence Length: 589 aa Download sequence

MASCDDDFSL LDDHQNPDAT QPSTNTQTPQ FTVNPYDQDS DPFDSEPDPS SRSCKRASER  60
DDVNNDVSKR TRLPSASSSA GDYRKDREEW SETAIACLLE AYTDKFMQLN RGNLRGKDWE  120
EVAATVGERC DKQSKSVEQC KNKVDNLKKR YKLERHRLSN GGVSVSHWPW FQQMEHIVGN  180
SMAAKAAADE EKNSVSGGSS ISTRHPKRHA TATATASPGS QIVNVKLKPS TNLRWRRVVF  240
KISGAALAGT APNNIDPKVA MLVAREISIA CRYGVEVAIV VGGRNFFCGD AWVTSTGLDR  300
CTAYQIGMMA TVMNSILLQS ALEKLGVKTR MQSAFSMPEV AEPYSRQRAI RHLEKGRVVI  360
FGGIGAGTGN PLFSTDTAAA LRASEIHADA VLKGANTDGV FVCDPRSNNI AAEHISFRDL  420
ASRGASPMDM MAMTYCEENG IPVVIFDLHE LGNISRALCG EPVDIEGNLS IISSGVFKLV  480
RVLERSSSKS RNCTPEHAIF SSIQKKLDKT AHHITRASVI TEKLLKISSE ASQYLGTKSG  540
DMLGLVQSLM EEGNSTLLSA HFAHFSVVPD VLLRKHGAGQ ADRGGVNF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10030.1	0.0	Trihelix family protein