PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu030627.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HB-other

Protein Properties

Length: 516aa MW: 57655.9 Da PI: 6.4582

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu030627.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	61.6	1.2e-19	21	76	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kRt t+ q+++Le+++ +++yp+++++ +LA++lgL+e+q++ WF+ rR k+k+ Oeu030627.1 21 KKRTVKTRAQVDALEKFYDEHKYPTESMKSQLAESLGLSEKQISGWFCHRRLKDKR 76 89****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 516 aa Download sequence
MEEETCEVRS EDDNALAEKS KKRTVKTRAQ VDALEKFYDE HKYPTESMKS QLAESLGLSE 60 KQISGWFCHR RLKDKRLLNE EPSAMGRQDR SSGIIQDGGS GFKQDSLGST KLGEDRNFDT 120 KEVESERLAG QEFSAADLTY EPVNHYTSNY NRINDPSSGG SSSLRNMSSH HNGDFFDVAS 180 SKYLTPKFPM DSKDVKVRHG PSGYLKVKGQ AENAAIIAVK KQLGSHYRVD GPPLGIEFDP 240 LPPGAFESSE QEPDNEPYCA GERVLQSIPG VSKIQKYPNF SEGYKYNYTG SHDAGMDGTN 300 FRMTRESEIS GSYLQQKLKM KTSTLDLGIN SPVHFPEASR KYMPDYESRD SYQKRPRHSI 360 EGMRVESVSS PPLLQTNGGK VRGEWTEPLF SKYNEVGPNV SRGGNIEYTP SNFTIKGNEY 420 PSSEDKGMPR RTIKDAKVYR ERITNEISEL DGVVPPKNGM SNSKRVRDGF SQQLNRKKLS 480 VIDTHPCPYQ LPRSVAEIPS SFSEDDGGAE MSSMD*

Sequence ? help Back to Top

Protein Sequence Length: 516 aa Download sequence

MEEETCEVRS EDDNALAEKS KKRTVKTRAQ VDALEKFYDE HKYPTESMKS QLAESLGLSE  60
KQISGWFCHR RLKDKRLLNE EPSAMGRQDR SSGIIQDGGS GFKQDSLGST KLGEDRNFDT  120
KEVESERLAG QEFSAADLTY EPVNHYTSNY NRINDPSSGG SSSLRNMSSH HNGDFFDVAS  180
SKYLTPKFPM DSKDVKVRHG PSGYLKVKGQ AENAAIIAVK KQLGSHYRVD GPPLGIEFDP  240
LPPGAFESSE QEPDNEPYCA GERVLQSIPG VSKIQKYPNF SEGYKYNYTG SHDAGMDGTN  300
FRMTRESEIS GSYLQQKLKM KTSTLDLGIN SPVHFPEASR KYMPDYESRD SYQKRPRHSI  360
EGMRVESVSS PPLLQTNGGK VRGEWTEPLF SKYNEVGPNV SRGGNIEYTP SNFTIKGNEY  420
PSSEDKGMPR RTIKDAKVYR ERITNEISEL DGVVPPKNGM SNSKRVRDGF SQQLNRKKLS  480
VIDTHPCPYQ LPRSVAEIPS SFSEDDGGAE MSSMD*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	3e-68	HB-other family protein