PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu030696.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 446aa MW: 50845.5 Da PI: 5.357

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu030696.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	31.5	4e-10	15	60	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g+W+ eEd +l + ++ G +W++ +++ g+ R++k+c++rw +yl Oeu030696.1 15 GAWS-EEDNKLREHIQSSGHSNWRLLPQYAGLARSGKSCRLRWVNYL 60 5565.89**************************************97 PP
2	Myb_DNA-binding	43.1	9.5e-14	66	109	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ ++eE +l+ ++++lG++ W+ Ia+ ++ gRt++++k++w+ Oeu030696.1 66 RGNYSKEEVDLIMGLHAKLGNK-WSDIAKNLP-GRTDNDIKNYWHA 109 899*****************.*****.*********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 446 aa Download sequence
MVKPCYVDGN GIKKGAWSEE DNKLREHIQS SGHSNWRLLP QYAGLARSGK SCRLRWVNYL 60 KPGVKRGNYS KEEVDLIMGL HAKLGNKWSD IAKNLPGRTD NDIKNYWHAH VKKRLKRNVT 120 GTSSLSEISQ EEPDKDFVMA ESSCIQELEN SEAASQGGVQ SMIERYEEQH SSPRTEGQSQ 180 SSHSHYEPMT ELSPRTMRAL LGKLTQDIVE QSLNVSKGRS PKRMKTSCVQ GAKEQGPPFE 240 RQFRLVNNGR TFRPQPRQPN GMQRPKVPKL LEVANQNVLK DSEETGTGES MEELPETSFG 300 RSKFERDRRD GEDPDQLLTI QFCTLPPVMA NNYLLANEFK NEEKEEEERE DNEEETCVLE 360 CEEDQTSRGA YDDEGDDGMT DIEEKIDLEA ERRKRGVSYN TLLKQLHRER GEAEVVQVDH 420 RSFVAEANSV ERFMYEGNYG PVRVV*

Sequence ? help Back to Top

Protein Sequence Length: 446 aa Download sequence

MVKPCYVDGN GIKKGAWSEE DNKLREHIQS SGHSNWRLLP QYAGLARSGK SCRLRWVNYL  60
KPGVKRGNYS KEEVDLIMGL HAKLGNKWSD IAKNLPGRTD NDIKNYWHAH VKKRLKRNVT  120
GTSSLSEISQ EEPDKDFVMA ESSCIQELEN SEAASQGGVQ SMIERYEEQH SSPRTEGQSQ  180
SSHSHYEPMT ELSPRTMRAL LGKLTQDIVE QSLNVSKGRS PKRMKTSCVQ GAKEQGPPFE  240
RQFRLVNNGR TFRPQPRQPN GMQRPKVPKL LEVANQNVLK DSEETGTGES MEELPETSFG  300
RSKFERDRRD GEDPDQLLTI QFCTLPPVMA NNYLLANEFK NEEKEEEERE DNEEETCVLE  360
CEEDQTSRGA YDDEGDDGMT DIEEKIDLEA ERRKRGVSYN TLLKQLHRER GEAEVVQVDH  420
RSFVAEANSV ERFMYEGNYG PVRVV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16770.2	5e-47	MYB family protein