PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu030823.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 318aa    MW: 36259.8 Da    PI: 5.0281
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu030823.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.21e-11144186754
                  HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
          HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  Oeu030823.1 144 MAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDTIDYMKEL 186
                  79*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MESWVTIPNE LNEVSPNVWS FSSSHQIPDF EMSNSLLLDQ FSHRYPFYEP QTLLDNFALP  60
QVCSSYNYPN ENSAPIQEDY TANLENEDFG LLDNAGLNGF EHETSRFKVE TLEAPKNMDN  120
SNVGFSTERK NKSKADGLPS KNLMAERRRR KRLNDRLSML RSIVPKISKM DRTSILGDTI  180
DYMKELLYKI NKLREEEIDK NINQMNLTGN LKEIKPNDDQ VLVRNPSKFH VERKDQDTRI  240
GICCTAKSGL LLSTLTTLEA LGLDIQQCVV SCFNEFSLQA SCYEAVEHRL VMSCEDVKQA  300
LFRNVGYGGS DCTKYGY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1146153ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.15e-63bHLH family protein