PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu030850.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

WOX

Protein Properties

Length: 102aa MW: 11747.6 Da PI: 11.0401

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu030850.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	31.9	2.2e-10	3	65	1	57
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC.....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl.....gLterqVkvWFqNrRakekk 57 +++R+ +t + ++ L + F n+ p+ +e+ ++ + l +++++V WF+NrRa e+k Oeu030850.1 3 KQQRWIPTFTKVDFLRSIFDGgNKSPNNAEILHIISTLslhnpVISKKNVGDWFKNRRACERK 65 679***************99************9999999************9997 PP
2	Wus_type_Homeobox	54.1	3.8e-18	3	67	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGk.iedkNVfyWFQNrkaRerqkq 65 +++RW Pt +++ L+++++ G ++Pn++ei +i ++L+ + i++kNV WF+Nr+a er+++ Oeu030850.1 3 KQQRWIPTFTKVDFLRSIFDGGNKSPNNAEILHIISTLSLHNPvISKKNVGDWFKNRRACERKRK 67 589**********************************998527899************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 102 aa Download sequence
MGKQQRWIPT FTKVDFLRSI FDGGNKSPNN AEILHIISTL SLHNPVISKK NVGDWFKNRR 60 ACERKRKHTC IENPQLKNLM HEVQPCSTNR RLRTFSLTGC I*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20700.1	2e-13	WOX family protein