PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu031003.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family YABBY
Protein Properties Length: 171aa    MW: 19384.1 Da    PI: 8.4947
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu031003.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY206.88e-6441583170
        YABBY   3 vfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssek 100
                   ++ +eq+Cy+ CnfCn +lavsvP   lf +vtvrCGhCt+l svn+a a q l+ ++    +  + +  e    +++++   ++++++++      
  Oeu031003.1   4 YVDVPEQLCYIPCNFCNIVLAVSVPCGNLFDIVTVRCGHCTNLWSVNMAAAFQPLSWQDV---QAPNYISSE----HKKIE-FGSSSKCNNKMAMRPP 93 
                  57889********************************************99999999885...222222222....22222.2333444444444556 PP

        YABBY 101 lsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                  +s+n+++ +      +rPPekrqrvPsayn+fikeeiqrika+nP+ishreafs+aaknWahfP+ihfgl
  Oeu031003.1  94 ISDNTEQRIV-----NRPPEKRQRVPSAYNQFIKEEIQRIKANNPEISHREAFSTAAKNWAHFPHIHFGL 158
                  7888888775.....9****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MSSYVDVPEQ LCYIPCNFCN IVLAVSVPCG NLFDIVTVRC GHCTNLWSVN MAAAFQPLSW  60
QDVQAPNYIS SEHKKIEFGS SSKCNNKMAM RPPISDNTEQ RIVNRPPEKR QRVPSAYNQF  120
IKEEIQRIKA NNPEISHREA FSTAAKNWAH FPHIHFGLML ETNNQAKRGF *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.17e-89YABBY family protein