PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu031048.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 199aa    MW: 21826.8 Da    PI: 4.6494
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu031048.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260131.14.5e-41501491100
       DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                  +CaaCk+lrr+C+++Cvlapyfp +++ kf +++++FGasn++kll++lpe +r+da++s+vy A+ar+rdPvyG++g i++lq+q+ +l+aela+ +
  Oeu031048.1  50 PCAACKILRRRCVDKCVLAPYFPPSEQLKFTIAQRVFGASNIIKLLQELPEAQRSDAVNSMVYDANARLRDPVYGCAGAIFQLQKQIIELQAELAKSQ 147
                  7**********************************************************************************************999 PP

       DUF260  99 ee 100
                  +e
  Oeu031048.1 148 AE 149
                  87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    
MECRENPSIT TTSATAAAVT AAASNSSLSP ISSPTGSFSS FPPRAVSFSP CAACKILRRR  60
CVDKCVLAPY FPPSEQLKFT IAQRVFGASN IIKLLQELPE AQRSDAVNSM VYDANARLRD  120
PVYGCAGAIF QLQKQIIELQ AELAKSQAEI LNMQYQNANL VEFICQKMLQ NQENSPQYQQ  180
DEDSQFFLDE SFLGLEPL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07900.11e-65LBD family protein