PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu031090.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family TCP
Protein Properties Length: 288aa    MW: 31744.8 Da    PI: 8.8341
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu031090.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP112.17.5e-35231542112
          TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec..eaesssssasnsssg......... 88 
                  + +kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak +i++l g++  +++++     ++s+s+   ss+         
  Oeu031090.1  23 TSQKDRHSKVSTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIEMAKDSIDKLEGLPPRHPNNTsvA--QNSESNP--SSTgtkvniqsg 116
                  679*************************************************************33333333121..1111111..111223344444 PP

          TCP  89 ..............kaaksaakskksqksaasalnlak 112
                                  +ks  + ++  +s ++ +n+ +
  Oeu031090.1 117 ssfnirpgpdpefmTTMKSFFPASSGAASLTNYQNFPH 154
                  45557777766665222222233333333333444444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MGMGSKGVGE RVQVQGGHIL RSTSQKDRHS KVSTAKGPRD RRVRLSAHTA IQFYDVQDRL  60
GYDRPSKAVD WLIEMAKDSI DKLEGLPPRH PNNTSVAQNS ESNPSSTGTK VNIQSGSSFN  120
IRPGPDPEFM TTMKSFFPAS SGAASLTNYQ NFPHDIMSRA SFQAKDRGLS LHTLQDQSST  180
HSTNLGPPGS TFQDTYQRMD SWSANGSVEN RVGSLIDSHA MSQVQRAFFS QDLPFSHREL  240
LQSNYSNSIQ HNPQPSVNQY SDVNSQFAFG FQVPARIHGD NEPETQN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31070.15e-47TCP family protein