PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu031135.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family Dof
Protein Properties Length: 180aa    MW: 20244.6 Da    PI: 10.5163
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu031135.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof113.68.9e-362585358
       zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggr.....rkn 58
                 e++lkcprCds+ntkfCyynnysl+qPry+Ck+CrryWtkGG++rn+PvG+g+     rkn
  Oeu031135.1 25 EASLKCPRCDSSNTKFCYYNNYSLTQPRYYCKTCRRYWTKGGTMRNLPVGAGSvrgrwRKN 85
                 6789***********************************************9733333444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    
MGAKTAGKGK SQSSGSHQTA ATPQEASLKC PRCDSSNTKF CYYNNYSLTQ PRYYCKTCRR  60
YWTKGGTMRN LPVGAGSVRG RWRKNKKEKS SLRVSQHYST GSSNTGKLNY QPRIFTVQVF  120
HPLGLYQLHL ALLKCVLTAM ENLQQTLVLI FILLQEILLL RAPIFIFLVC SNMERAPQI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.13e-32Dof family protein