PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu031198.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB_related
Protein Properties Length: 160aa    MW: 18197.4 Da    PI: 6.5115
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu031198.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding49.69.2e-161054147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg+ +teE  l+ +++ +lG++ W++Ia++++ gRt++++k++w+++
      Oeu031198.1 10 RGNYSTEEVHLIMELHDKLGNK-WSAIAAEFP-GRTGNDIKNYWHSH 54
                     899*******************.*********.***********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MNYLKAGVKR GNYSTEEVHL IMELHDKLGN KWSAIAAEFP GRTGNDIKNY WHSHVKKRSK  60
SNVPQTRTMK QQPCDASSLS EILNEEQPNH VNYNLKIQKE SLSEDVVDAE PSCLQELENS  120
VPPFNNPNSV ARGITWDSME GNFWTEPMVI LSHQLVNYR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.28e-23MYB_related family protein