PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu031316.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family ARF
Protein Properties Length: 889aa    MW: 98191.9 Da    PI: 6.9527
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu031316.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.81e-23121222199
                  EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
           B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                  f+k+lt sd++++g +++p++ ae+        +++++  ++l+ +d+++++W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   ++++ +
  Oeu031316.1 121 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfsQQPPA--QELIARDLHNNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--WNDKNQ 214
                  99*****************************8544444..48************************************************..788888 PP

                  .EEEEE-S CS
           B3  92 lvvkvfrk 99 
                  l+++++r+
  Oeu031316.1 215 LLLGIRRA 222
                  9****997 PP
2Auxin_resp119.23.3e-39247330183
   Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                  aahaa+t+s F++++nPras+seFv++++k++ka++ ++vsvGmRf+m fete+ss rr++Gt++g+sd+dpvrWpnS+Wrs+k
  Oeu031316.1 247 AAHAAATNSRFTIFFNPRASPSEFVIPLAKYVKAVYhTRVSVGMRFRMLFETEESSVRRYMGTITGISDFDPVRWPNSHWRSVK 330
                  79*********************************9789******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 889 aa     Download sequence    
MKPSSAGLNQ QSPEGDKNCL NSELWHACAG PLVSLPAVGS HVVYFPQGHS EQVAVSTNKE  60
VDAQIPNYTS LPPQLICQLH NATMHADIET DEVYAQMTLQ PLSLVCRQLY FKISKQPTNY  120
FCKTLTASDT STHGGFSVPR RAAEKVFPPL DFSQQPPAQE LIARDLHNNE WKFRHIFRGQ  180
PKRHLLTTGW SVFVSAKRLV AGDSVLFIWN DKNQLLLGIR RANRPQTVMP SSVLSSDSMH  240
LGLLAAAAHA AATNSRFTIF FNPRASPSEF VIPLAKYVKA VYHTRVSVGM RFRMLFETEE  300
SSVRRYMGTI TGISDFDPVR WPNSHWRSVK VGWDESTAGE RQPRVSLWEI EPLTTFPMYP  360
SPFPVRLKRP WPPGLPSFSG MKNDDMGINS SLMWLRGDIG DCGMQSLNFQ GMGVTPWMQP  420
RLDTSTLGMR TDMYQAMAAA AAAALQEMRV VDPSKQILSP LVQFQQPPAV ASRTAGLVQS  480
QIMQQSHSPS PFLQTFQESH PQASLQQQTH HLQQQLQHQN SFSNLPFQQQ QLIDPQQVSS  540
AIPVLSQFGS NSQALSSERQ SISSMHPQNF LDSNVKTVTS NINSPLHSLL GSVSQVESPN  600
LLNVPRSSDL LSSSGWPTKR VAIDPLFHLG VSQGISSDQL APPNTNVSQN AVSLPPFPGR  660
ECLMDQEGSN DPQNHLLFGF NMDSSSLLTQ NGISNLRGVG SDCDNPTIAF PSSNYLTSTG  720
TDYSLDPAVT SSSCINESSV MQSSKSMGQP DPSSKTFVKV HKSGSFGRSL DMTKFSSYHE  780
LRSELARMFG LDGQLEDPLR SGWQLVFVDR ENDVLLLGDD PWLEFVNNVW CIKILSPQEV  840
QEMGKRGLEL LNSVPIQRLP GSSCDSYASR QESRNMNAGI PSVGTLDF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37020.20.0ARF family protein