PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu031351.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family LBD
Protein Properties Length: 217aa    MW: 24214.2 Da    PI: 4.5689
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu031351.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260116.41.8e-3671071100
       DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelall 97 
                  +C aCk+lrrkC+++C++apyf  ++ +++f +vhk+FGasnv+kll +lp ++r+da+ +l yeA ar++dP+yG+v+ il+lq+ +++l++e++++
  Oeu031351.1   7 SCGACKFLRRKCTSECIFAPYFSYDHaASHFSAVHKVFGASNVSKLLLHLPVQNRSDAAITLSYEALARMQDPIYGCVAYILALQKLVATLEEEIETI 104
                  6***********************9978*******************************************************************999 PP

       DUF260  98 kee 100
                  +++
  Oeu031351.1 105 GNQ 107
                  887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MTGLGSSCGA CKFLRRKCTS ECIFAPYFSY DHAASHFSAV HKVFGASNVS KLLLHLPVQN  60
RSDAAITLSY EALARMQDPI YGCVAYILAL QKLVATLEEE IETIGNQMAN IGVDAPNYVT  120
SQETNVPNGV LQFSSVYTNV NDHINQQSLQ LQQPENLSAN QACSSQMNVQ FPQENLFEEE  180
IFQAYSDSSV FDRFYEELNQ DMYLKSQWMC STLNSR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06080.11e-58LBD family protein