PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu031474.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YB
Protein Properties Length: 154aa    MW: 17326.5 Da    PI: 4.8202
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu031474.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB44.53.8e-1419114696
        NF-YB   6 rflPianvsrimkkvlPanakisk.....daketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                   +lP + v r++k  l + +k s+     ++ +   e +  fi f+++ asd c++ kr+ in++d++ al ++ f ++v+pl++ l+++r  +++
  Oeu031474.1  19 DELPKTIVRRVVKDKLSQLSKDSDvnvlrESLQGFCESARIFIHFLSATASDVCKESKRQIINAEDVFKALEEIEFAEFVAPLRTSLEEFRRKNAK 114
                  57899999999999999888766521111444455577888**************************************************87765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
MSEKEKDVVV TEKVVSEADE LPKTIVRRVV KDKLSQLSKD SDVNVLRESL QGFCESARIF  60
IHFLSATASD VCKESKRQII NAEDVFKALE EIEFAEFVAP LRTSLEEFRR KNAKRKSESL  120
KAKEMNKKGK MKEPPVTNGG GSEEEDEDES SEE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27470.13e-36NF-YB family protein