PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu031633.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 188aa    MW: 18980.9 Da    PI: 5.6913
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu031633.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H221.65.6e-0785107123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  ++C+ C++sF+++  L  H+r+H
  Oeu031633.1  85 FQCSVCSRSFRSSKALFGHMRLH 107
                  89*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MGRAGVSAFT SYRPLGPPPQ GNSPAASSGA AGGASRSGLI EVARAVPVAV GGGAGGSSAA  60
GGSQIGDFIV RKRDMGHAEG GVFPFQCSVC SRSFRSSKAL FGHMRLHPDR GWRGAFPPPS  120
FRAEEDFADV PNLIQNAAAG RGQQVEEDPA DGVGNAPAAA EGGDGSATIK YKVTDLNFPP  180
LPDTDEE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35700.14e-14C2H2 family protein