PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu031816.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YB
Protein Properties Length: 157aa    MW: 17452.8 Da    PI: 4.3972
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu031816.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB78.21.2e-241192384
        NF-YB  3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplk 84
                 ++d+ lP a +++i+k++lP + ++++da++++ ec +efi +v+se+++ c+re+rkti+++ +l al +lGf +y e++ 
  Oeu031816.1 11 KEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNEVCNREERKTIAPEHVLKALQDLGFGEYNEEVF 92
                 6899*************************************************************************98764 PP
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    
MEPMDIVGKT KEDASLPKAT MTKIIKEMLP PDVRVARDAQ DLLIECCVEF INLVSSESNE  60
VCNREERKTI APEHVLKALQ DLGFGEYNEE VFAAYEQHKL ETMAMRTGKW SNGADMSEEE  120
ALVEQQRMFA EARARMNGGP MIPKPADSDS CPSLNS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23090.41e-87NF-YB family protein