PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu031881.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HD-ZIP
Protein Properties Length: 727aa    MW: 79446.9 Da    PI: 5.7709
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu031881.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.65.9e-2058113156
                  TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
     Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                  +++ +++t++q++e+e++F+++++p+ ++r+eL ++lgL+  qVk+WFqN+R+++k
  Oeu031881.1  58 KKRYHRHTQHQITEMEAFFKECPHPDDKQRKELGRQLGLEPLQVKFWFQNKRTQMK 113
                  688999***********************************************998 PP
2START218.12.9e-682464661206
                  HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEE CS
        START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevi 85 
                  ela +a++el+++a+++ep+W  s     e + ++e++++f+++ +      ++ea+r+s+vv+m++  lve+l+d + qW+  +     +a+t+ev+
  Oeu031881.1 246 ELAVAAMEELIRMAQSGEPLWIPSTdnsaETLSEEEYIRTFPRGIGpkplgLKSEASRESAVVIMNHISLVEILMDAN-QWTSVFSsivsRAMTVEVL 342
                  57899******************999999999***********999********************************.******************* PP

                  CTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSX CS
        START  86 ssg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrl 176
                  s+g      galq+m+ae+q++splvp R+ +f+Ry++q g+g+w++vdvS+d+ +  +    + R++++pSg+li++++ng+skv+wvehv++++r+
  Oeu031881.1 343 STGvagnynGALQVMTAEFQVPSPLVPtRENYFARYCKQNGDGTWAVVDVSLDNLRATS----ISRCRRRPSGCLIQELPNGYSKVIWVEHVEVDDRS 436
                  *********************************************************76....7********************************** PP

                  XHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
        START 177 phwllrslvksglaegaktwvatlqrqcek 206
                  +h+++++lv+sgla+ga++wvatl+rqce+
  Oeu031881.1 437 VHSIYKPLVNSGLAFGARRWVATLDRQCER 466
                  ****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 727 aa     Download sequence    
MFQPNMFDSH HSLLDMSHKS PENEMDLIRD DEFESKSVTD IMEAPSGDDG DPNQRPKKKR  60
YHRHTQHQIT EMEAFFKECP HPDDKQRKEL GRQLGLEPLQ VKFWFQNKRT QMKSQHERHE  120
NTQLRNENEK LRAENIRYKE ALSNAACPNC GGPAAIGEMS FDEQHLRIEN ARLREEIDRI  180
SGIAAKYVGK PMLSYAHISP GSSRSLDLGS GNFGPQTGMP GEIYGASDLL RSVSGPTDAN  240
KPMIIELAVA AMEELIRMAQ SGEPLWIPST DNSAETLSEE EYIRTFPRGI GPKPLGLKSE  300
ASRESAVVIM NHISLVEILM DANQWTSVFS SIVSRAMTVE VLSTGVAGNY NGALQVMTAE  360
FQVPSPLVPT RENYFARYCK QNGDGTWAVV DVSLDNLRAT SISRCRRRPS GCLIQELPNG  420
YSKVIWVEHV EVDDRSVHSI YKPLVNSGLA FGARRWVATL DRQCERLASV MANNISAGDV  480
GVISSPEGRK SMLKLAERMV MSFCTGVGAS TAHTWTTMSG SGADDVRVMT RKSVDDPGRP  540
PGIVLSAATS FWLPVPPKRV FDFLRDENSR NEWDILSNGG LVQEMAHIAN GRDPGNSVSL  600
LRVNSANSSQ SNMLILQESC TDSTGSYVIY APVDIVAMNV VLSGGDPDYV ALLPSGFAIL  660
PDGPTNLAGG INAEVGSGGS LLTVAFQILV DSVPTAKLSL GSVATVNSLI KCTVERIKGS  720
VLCDCA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21750.20.0HD-ZIP family protein