PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu032019.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 538aa    MW: 60751 Da    PI: 4.765
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu032019.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS2838.7e-871645351374
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl....fsevsPilkfs 94 
                  lv+ Ll cAe v +++   a++lL+  + l+s +++++qR++ yfteAL +++ r++ ++       e+++ +++++l+ l+     f++ +P+ ++s
  Oeu032019.1 164 LVQGLLFCAERVGNKQYDSARKLLESCHMLSSIKKSTIQRVVYYFTEALYEKIDRETGRIK-GNDLAEKQSLDVEKKLMNLNPivlaFHKGFPLSQVS 260
                  578899*************************************************555554.3333333333444444443325677*********** PP

         GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlel 191
                  ++   q I e v++ ++vHiiD+ i  G+++  L+qaLa+R e p  +l+iT+vg    +sk  +eetg++L++fAe+l+++f+fn+++++++ dl+ 
  Oeu032019.1 261 QFSGIQSIIEHVSNFSKVHIIDLKIWTGMHFTILMQALAARCECPInHLKITAVGT---KSKPLIEETGRQLKSFAESLNLNFSFNIIMVEDILDLTE 355
                  *****************************************966545*********...6899*********************************** PP

         GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErel 289
                  + ++++ +Ea+aV  ++ l+++ +++  les    ++k++k+++P v++v+e+ea+ ns+ F++rf+eal +y a+fd le+ + +++++r+  E ++
  Oeu032019.1 356 SLFDLDADEAVAVYAAYVLKYMIAQEDRLES----LMKVIKNINPCVMIVIESEANDNSPYFVNRFVEALFFYGAFFDILEECMNHDESNRTISESKI 449
                  ***********************88888888....*************************************************************** PP

         GRAS 290 lgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  ++++i+n+va+eg+err rh +   Wr+ +e +G+ +++ls +   q +lll++++ +   +++++ ++l++gWk+ +L svSaW+
  Oeu032019.1 450 FSPAIRNIVAAEGEERRFRHVSIDIWRSCFEWFGMVEIELSMSSIYQGSLLLNNFScGGSCSIDKDGKCLIFGWKGTRLNSVSAWK 535
                  ********************************************************66669************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 538 aa     Download sequence    
MGKHNSSKAF ENEDGRKLAK ENSPRGSEDW VESWETDFEG LENTSEQNLL HEYHQEQQLI  60
EEFGSLHDLY LDIVSPPFQS SEEGINQLVG IESQTSMLIE PSHETNCTKI NFGLSSVDSI  120
IKLAAVKFLQ SNSSSSDELS VLSHPYASSF LGSAKEEMDK DVQLVQGLLF CAERVGNKQY  180
DSARKLLESC HMLSSIKKST IQRVVYYFTE ALYEKIDRET GRIKGNDLAE KQSLDVEKKL  240
MNLNPIVLAF HKGFPLSQVS QFSGIQSIIE HVSNFSKVHI IDLKIWTGMH FTILMQALAA  300
RCECPINHLK ITAVGTKSKP LIEETGRQLK SFAESLNLNF SFNIIMVEDI LDLTESLFDL  360
DADEAVAVYA AYVLKYMIAQ EDRLESLMKV IKNINPCVMI VIESEANDNS PYFVNRFVEA  420
LFFYGAFFDI LEECMNHDES NRTISESKIF SPAIRNIVAA EGEERRFRHV SIDIWRSCFE  480
WFGMVEIELS MSSIYQGSLL LNNFSCGGSC SIDKDGKCLI FGWKGTRLNS VSAWKFG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.12e-50GRAS family protein