PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu032329.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family Dof
Protein Properties Length: 262aa    MW: 28668.9 Da    PI: 9.2708
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu032329.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof126.29.7e-403190362
       zf-Dof  3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
                 e +lkcprCds+ntkfCyynny+lsqPr+fCk+CrryWtkGGalrnvP+Ggg+rkn+k++
  Oeu032329.1 31 EPTLKCPRCDSSNTKFCYYNNYNLSQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNRKMK 90
                 6689*****************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MSPDSLVEKV AGKDDSQGSG NRRNAASRPQ EPTLKCPRCD SSNTKFCYYN NYNLSQPRHF  60
CKTCRRYWTK GGALRNVPIG GGCRKNRKMK SCSRLSGDSK DSSGSYGVGS NSPLMGFNFP  120
LSSSLKQGEG IQEMGSSLNF QSHLSNSIES LSSMNQNLHW KLPREILAMH EPNQIQKPQP  180
ILFQNLEISK PEACGIGSSR KEGTETPIGN LSTEWFFGST YAQGTTSTPP ASNSTSNTIE  240
SNTSNWNGMT WTNLNQYSAL P*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.13e-34Dof family protein