PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu032425.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB_related
Protein Properties Length: 305aa    MW: 33523.3 Da    PI: 8.6147
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu032425.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.22.2e-09555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     ++rWT+ E+  ++ + +++G g W+ I +          Rt  ++k++w++
      Oeu032425.1  5 KNRWTETEEAAFKAGMAKHGIGKWSEILKDPEfkivlSSRTNVNLKDKWRN 55
                     68***********************************9************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MGPPKNRWTE TEEAAFKAGM AKHGIGKWSE ILKDPEFKIV LSSRTNVNLK DKWRNMNMMA  60
SGSGSQYKAS TLSKNNQKTS NDDGNSVAPG MVTKNDKEAL PLAVYGETPE ETSSKTQISR  120
LDDLILEAIT KLKEPHGSNR AAIMQYIVEC QLAPPDFEKK LAANLKILTE AGRLVKVKRL  180
YKIASSSMSL DVGKDPSPLL QGETHKVSSE VYINKFRMLT RAEVDAELEA MMRMTTQKAA  240
AAAERAVEEA EAAIAAAEEA EREAKEAEAK AEAAWCVAEE EMKSFKHKNV HARIPGGKYA  300
RAFF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.14e-50MYB_related family protein