PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu032473.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family SBP
Protein Properties Length: 134aa    MW: 14951.9 Da    PI: 9.3922
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu032473.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP131.43.1e-4154129277
                  -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
          SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                  Cqv++C +d++ ak yhrrhkvCe+h+kap++lv+gl+qrfCqqCsrfhe+sefD +krsCr rLakhnerrrk +
  Oeu032473.1  54 CQVQDCPVDMTGAKPYHRRHKVCEFHAKAPEILVAGLQQRFCQQCSRFHEVSEFDGAKRSCRGRLAKHNERRRKGS 129
                  *************************************************************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    
METSKAEGKR IAKVAMLAEE EEDGKDEDVK NKKRASTLTS IRVSSAGGST QPYCQVQDCP  60
VDMTGAKPYH RRHKVCEFHA KAPEILVAGL QQRFCQQCSR FHEVSEFDGA KRSCRGRLAK  120
HNERRRKGSN DSL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33810.19e-40SBP family protein