PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu032553.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

HD-ZIP

Protein Properties

Length: 198aa MW: 22172.8 Da PI: 9.6324

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu032553.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	60.4	2.9e-19	41	95	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq +Lee F++++++s +++ LAk+l+L rqV vWFqNrRa+ k Oeu032553.1 41 RKKLRLSKEQAAVLEETFKEHNTLSPKQKLALAKELNLRPRQVEVWFQNRRARTK 95 788899***********************************************98 PP
2	HD-ZIP_I/II	125.7	2e-40	41	130	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlskeq+++LEe+F+e+++L+p++K +la+eL+l+prqv+vWFqnrRARtk+kq+E+d+++L+r++++l+een+rL+kev+eLr +l Oeu032553.1 41 RKKLRLSKEQAAVLEETFKEHNTLSPKQKLALAKELNLRPRQVEVWFQNRRARTKLKQTEVDCDYLRRRCENLTEENRRLQKEVNELR-AL 130 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence
MASSPNSTLS SLSGKRNERE ENDGERATSS LEEEDGGEAA RKKLRLSKEQ AAVLEETFKE 60 HNTLSPKQKL ALAKELNLRP RQVEVWFQNR RARTKLKQTE VDCDYLRRRC ENLTEENRRL 120 QKEVNELRAL KLSPHFYMNT NPPTTLTMCP QCERVAVSSS SSSAAGAGIT RQHNPAIEIS 180 VSKQGQNGNR FSPGFAI*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	90	98	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60390.1	4e-72	HD-ZIP family protein