PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu032610.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family FAR1
Protein Properties Length: 174aa    MW: 20003.9 Da    PI: 10.325
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu032610.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR179.27.8e-2534124190
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  +fYn+YA+e+GFs r s+skk+ +++e ++++fvC+keg ++++ ++++ ++r+r   r+gCkakl+++k+k + +w v+++++ HnH+l+
  Oeu032610.1  34 EFYNKYAREAGFSGRLSNSKKRPDTNEHIWKQFVCYKEGVTDDKYRQKKCSERHRGIVRVGCKAKLTMTKSKsSPNWIVSRFVESHNHALT 124
                  6**********************************************9999*******************99899**************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MEDKTSIQTF TPQVAEEHKP KVGQEFETIK GACEFYNKYA REAGFSGRLS NSKKRPDTNE  60
HIWKQFVCYK EGVTDDKYRQ KKCSERHRGI VRVGCKAKLT MTKSKSSPNW IVSRFVESHN  120
HALTTPSKVH LLRSHRHVSN AKKALVKQFL PSQTLQKLGH IDVHDNHMKE QLC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-26FAR1 family protein