PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu032679.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 231aa MW: 26434.9 Da PI: 10.3057

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu032679.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.2	9e-09	8	54	3	47
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 WT eE +++ +a+ + + +W+++a++++ g++ ++ + ++ + Oeu032679.1 8 VWTREENKKFERAIVVYDEKtpdRWDKVASMIP-GKSVTDVMHQYREL 54 6******************************.********9965 PP
2	Myb_DNA-binding	42.7	1.3e-13	105	149	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++ + +++G+g+W+ I+r + ++t+ q+ s+ qky Oeu032679.1 105 PWTEEEHRRFLLGLERHGKGDWRNISRNFVITKTPTQVASHAQKY 149 8***************************889*********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MQQRKSTVWT REENKKFERA IVVYDEKTPD RWDKVASMIP GKSVTDVMHQ YRELVKDISD 60 IEAGLVPIPG YLAASFTFEL GENRNFDAYR KRGRSCDQER KKGVPWTEEE HRRFLLGLER 120 HGKGDWRNIS RNFVITKTPT QVASHAQKYF LRQLTGGKDK RRPSIHDITL HLTTTTTTTS 180 KTTWSESAEK KPNSTTATNK GALLVFDSIA YPQNIARFHG RPVSNICSGY *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	90	102	RKRGRSCDQERKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38090.1	2e-80	MYB family protein