PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu032971.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family Dof
Protein Properties Length: 278aa    MW: 31009.5 Da    PI: 4.4905
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu032971.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof116.79.5e-372580661
       zf-Dof  6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                  +cprC stntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvP Ggg+rk++++
  Oeu032971.1 25 PNCPRCASTNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPFGGGCRKSRRV 80
                 58***************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MMDSLPRPLI VDGTKWRSKN VEIAPNCPRC ASTNTKFCYY NNYSLSQPRY FCKGCRRYWT  60
KGGSLRNVPF GGGCRKSRRV KAARPVECGG ANYVDRGPSP TGDQCVDIDL AAVFANYLNQ  120
NVENNEKCGG EESSSPGASC ASSSEVQASS LDIDIQLEDP LFEYQKPVEP VDFIDAAQFQ  180
GVLITDHVSN IHEENVQKFM DHDPYDFKLQ TMLGDELGPE IWSDSPNLPN FQCQLPMLQF  240
RDFEVFSPND QLRISANLDG NYWGSFDLSG YELFSGP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52440.12e-40Dof family protein