PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu033423.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

CO-like

Protein Properties

Length: 350aa MW: 39198.9 Da PI: 5.5112

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu033423.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.8	1.6e-06	15	57	4	40
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 r+C+++++ + +C+ + +lC C +H H++v Oeu033423.1 15 RICDTCQSAACTVYCRADTAYLCTGCDARIHAAnpvasrHERV 57 79****99*******************667777788776 PP
2	zf-B_box	29.9	1.1e-09	57	102	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 r+C+ +e+ ++ + C+ + lC +C +H+ H++vp+ Oeu033423.1 57 VRVCEACERAPAAFLCKADAASLCTTCDADIHSAnqlarrHQRVPI 102 689***************************668999999997 PP
3	CCT	68.2	2.2e-23	283	326	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRY+eK+k RkFeK+irY+sRKa+Ae+RpR+KGrF+k++ Oeu033423.1 283 REARVLRYREKKKMRKFEKTIRYASRKAYAETRPRIKGRFAKRT 326 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MLNEKNGDTS TNWARICDTC QSAACTVYCR ADTAYLCTGC DARIHAANPV ASRHERVRVC 60 EACERAPAAF LCKADAASLC TTCDADIHSA NQLARRHQRV PILPIPGSLF GPLAPSPSAL 120 IMTPTGETDA DEEMEEATSW LLLNPVKNSE NQVNNEVDAY LDLNEYNSCQ EIHFTDDQYN 180 NQKQRYNVPD DDKKMYGSDS VVPVQYGSKG KEEVDLNSFQ LGIEFDISND GYGYPVMDIG 240 VVPESRLSEV SSSVSQQRPS KDTVDLFSNS PIQMPTQLSG TDREARVLRY REKKKMRKFE 300 KTIRYASRKA YAETRPRIKG RFAKRTDIDQ MFYTSLRVDS TRYGIVPSF*

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MLNEKNGDTS TNWARICDTC QSAACTVYCR ADTAYLCTGC DARIHAANPV ASRHERVRVC  60
EACERAPAAF LCKADAASLC TTCDADIHSA NQLARRHQRV PILPIPGSLF GPLAPSPSAL  120
IMTPTGETDA DEEMEEATSW LLLNPVKNSE NQVNNEVDAY LDLNEYNSCQ EIHFTDDQYN  180
NQKQRYNVPD DDKKMYGSDS VVPVQYGSKG KEEVDLNSFQ LGIEFDISND GYGYPVMDIG  240
VVPESRLSEV SSSVSQQRPS KDTVDLFSNS PIQMPTQLSG TDREARVLRY REKKKMRKFE  300
KTIRYASRKA YAETRPRIKG RFAKRTDIDQ MFYTSLRVDS TRYGIVPSF*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	291	297	REKKKMR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02380.1	1e-107	CO-like family protein