PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu033508.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HD-ZIP
Protein Properties Length: 751aa    MW: 83964.1 Da    PI: 6.6075
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu033508.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox67.22.2e-21100155156
                  TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
     Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                  r+k +++t++q++e+e+lF+++++p++++r+eL+k+lgL  rqVk+WFqNrR++ k
  Oeu033508.1 100 RKKYHRHTAQQIKEMEALFKESPHPDEKQRQELSKQLGLHPRQVKFWFQNRRTQIK 155
                  7999************************************************9877 PP
2START203.68.3e-642694904206
                  HHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEECT CS
        START   4 eeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetleviss 87 
                  e+a++el k+a+++ep+W +s+    e++n+d ++++f+++++        +ea+r++++ + +l++  ++++d++ qW+e ++    ka+t+ v s+
  Oeu033508.1 269 EKATDELKKMATSSEPLWIRSYetgrEILNYDAYMKEFPTENSsnrqpkTCIEASRETRIIFVDLPRIIQSFMDVN-QWKELFPclisKAATVYVMSN 365
                  68999*********************************999999****999*************************.********************* PP

                  T......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXH CS
        START  88 g......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrlph 178
                  g      ga+qlm+aelq+l+p+v+ R+++fvR+++ql+a++w+i dvS+d  +++  ++s+++++++pSg++i+++sngh+kvtwveh ++++ ++h
  Oeu033508.1 366 GegvnrdGAVQLMFAELQMLTPVVAtREVYFVRCCKQLSADQWAIIDVSIDKVEDNI-DASLAKCRKRPSGCIIQDTSNGHCKVTWVEHLECQKTTVH 462
                  *******************************************************98.9*************************************** PP

                  HHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
        START 179 wllrslvksglaegaktwvatlqrqcek 206
                  +l+r +v+sgla+gak+w  tlq+qce+
  Oeu033508.1 463 SLYRTIVNSGLAFGAKHWIVTLQQQCER 490
                  **************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 751 aa     Download sequence    
MGVVDMSNPP SSHTKDFLAT PALSLSLAGI FRDVRATAAT AVEVEGRDGE SGGYGGKRED  60
TVEISSENSG PTKSRSEDDY EAEGEHDDEE DEDTHKMKKR KKYHRHTAQQ IKEMEALFKE  120
SPHPDEKQRQ ELSKQLGLHP RQVKFWFQNR RTQIKAIQER HENSLLKTEM EKIREENKVL  180
RETIKKSCCL SCGFATSRKD ATEEQQLRIE NARLKEELEK LRTAIGKCNP RASPNSSCSS  240
GNEQGIRSSL DFSTGIFGHE MSRIMDAVEK ATDELKKMAT SSEPLWIRSY ETGREILNYD  300
AYMKEFPTEN SSNRQPKTCI EASRETRIIF VDLPRIIQSF MDVNQWKELF PCLISKAATV  360
YVMSNGEGVN RDGAVQLMFA ELQMLTPVVA TREVYFVRCC KQLSADQWAI IDVSIDKVED  420
NIDASLAKCR KRPSGCIIQD TSNGHCKVTW VEHLECQKTT VHSLYRTIVN SGLAFGAKHW  480
IVTLQQQCER LVFFMATNVP IKDSSGIATT AGRKSILKLA QRMTWSYCRA LGASSYNTWS  540
KIPSKTGDDI RVASRKNIND PGEPLGVILC AVSSVWLPIS HHVLFDFLRD ENHRNEWDIM  600
SNGSPVQCIG NLAKGQDRGN AVTIQAMKTK DQNMWILQDS CTNAYESMVV YAPVDVNGMQ  660
SVIAGCDSSN IAVLSSGFSI LPDGIESRSL VITSRPEEKS TEGGSLLTIA FQILASNSLT  720
AKLSMESIDS VNTLISCTLQ NIKRILQCEE *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
198102KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79840.10.0HD-ZIP family protein