PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu033514.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 249aa    MW: 27700.8 Da    PI: 8.608
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu033514.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.90.00011972351255
                  HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  R +++ +++ +L +l+ +      +K + a++L +A+ YI+ Lq
  Oeu033514.1 197 RKEKLGDRITTLHQLVSPF-----GKTDTASVLSEAIGYIRFLQ 235
                  6678889999999999998.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MMPGNPNWWS INGMHPQYQH QHQISSSQSS TASSQYLYGS SSFSSNSSSD RHTNQEFPLR  60
SWSQLLMGGF TGDEDMFGTT LLRQEALENG EDKVLNSSSF RVPVLDVKQE SSHYYRQVDD  120
EFQACKSSWP QLIPVSSPNS CITSLSNSFL NFSSSKGNRK NQNPDQYSSK CNSTITGGIS  180
KKPRVQQSST QPALKVRKEK LGDRITTLHQ LVSPFGKTDT ASVLSEAIGY IRFLQAQIEV  240
MLHILCSK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.12e-29bHLH family protein